Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJC95005.1 | AJC95046.1 | SHYC_00925 | SHYC_01165 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
| AJC95045.1 | AJC95046.1 | SHYC_01160 | SHYC_01165 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.976 |
| AJC95045.1 | AJC95047.1 | SHYC_01160 | SHYC_01170 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putative DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.742 |
| AJC95045.1 | fadX | SHYC_01160 | SHYC_01155 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA transferase FadX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. | 0.503 |
| AJC95046.1 | AJC95005.1 | SHYC_01165 | SHYC_00925 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
| AJC95046.1 | AJC95045.1 | SHYC_01165 | SHYC_01160 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.976 |
| AJC95046.1 | AJC95047.1 | SHYC_01165 | SHYC_01170 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putative DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.763 |
| AJC95046.1 | AJC95182.1 | SHYC_01165 | SHYC_01880 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| AJC95046.1 | AJC95184.1 | SHYC_01165 | SHYC_01890 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.976 |
| AJC95046.1 | AJC95332.1 | SHYC_01165 | SHYC_02640 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| AJC95046.1 | AJC96849.1 | SHYC_01165 | SHYC_10605 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| AJC95046.1 | fadX | SHYC_01165 | SHYC_01155 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA transferase FadX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. | 0.483 |
| AJC95046.1 | rplN | SHYC_01165 | SHYC_03195 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.453 |
| AJC95046.1 | rpsE | SHYC_01165 | SHYC_03230 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.544 |
| AJC95047.1 | AJC95045.1 | SHYC_01170 | SHYC_01160 | Putative DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.742 |
| AJC95047.1 | AJC95046.1 | SHYC_01170 | SHYC_01165 | Putative DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.763 |
| AJC95047.1 | fadX | SHYC_01170 | SHYC_01155 | Putative DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA transferase FadX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. | 0.476 |
| AJC95047.1 | rplN | SHYC_01170 | SHYC_03195 | Putative DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.707 |
| AJC95047.1 | rpsE | SHYC_01170 | SHYC_03230 | Putative DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.667 |
| AJC95182.1 | AJC95046.1 | SHYC_01880 | SHYC_01165 | RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
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