Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AJC95405.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
AJC95404.1
BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.839
AJC94989.1
Crp/Fnr family transcriptional regulator.
  
     0.679
nanK
N-acetylmannosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
panD
Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
 
 0.631
AJC95115.1
Membrane protein; Similarity to database matches extends upstream of ORF, but no alternate start codon is present; the sequence of this region has been independently verified by PCR/Sanger sequencing; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
AJC96377.1
YfhO family membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
AJC95517.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.533
AJC95402.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
AJC96376.1
YfhO family membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
AJC96805.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.467
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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