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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brnQ-2Branched-chain amino acid ABC transporter substrate-binding protein; Component of the transport system for branched-chain amino acids. (448 aa)    
Predicted Functional Partners:
AJC96229.1
NorD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
AJC96228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; putative denitrification regulatory protein NirQ.
  
    0.780
AJC96227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
AJC96226.1
Putative ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.719
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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