STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC96375.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)    
Predicted Functional Partners:
AJC96376.1
YfhO family membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
AJC96377.1
YfhO family membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.947
AJC95115.1
Membrane protein; Similarity to database matches extends upstream of ORF, but no alternate start codon is present; the sequence of this region has been independently verified by PCR/Sanger sequencing; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.822
AJC96767.1
glycosyltransferase/CsbB stress response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.773
AJC95638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.628
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.541
rbgA
GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.541
traP
Signal transduction protein TRAP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
AJC96811.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.509
AJC95629.1
Ntn-choloylglycine hydrolase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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