Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC96558.1Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
patA
N-acetyl-L,L-diaminopimelate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
comK
Competence transcription factor ComK.
  
     0.707
AJC95629.1
Ntn-choloylglycine hydrolase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.552
qoxD
Quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
AJC95638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
AJC96167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.483
traP
Signal transduction protein TRAP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
AJC95921.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
AJC96633.1
Kinase associated protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
AJC96227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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