Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJC94881.1 | AJC94891.1 | SHYC_00260 | SHYC_00310 | Nonribosomal peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
| AJC94881.1 | aroF | SHYC_00260 | SHYC_05950 | Nonribosomal peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
| AJC94881.1 | menF | SHYC_00260 | SHYC_09140 | Nonribosomal peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.974 |
| AJC94891.1 | AJC94881.1 | SHYC_00310 | SHYC_00260 | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nonribosomal peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
| AJC94891.1 | aroC | SHYC_00310 | SHYC_07200 | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.889 |
| AJC94891.1 | aroE | SHYC_00310 | SHYC_06570 | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.886 |
| AJC94891.1 | aroF | SHYC_00310 | SHYC_05950 | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.878 |
| AJC94891.1 | menF | SHYC_00310 | SHYC_09140 | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.932 |
| AJC94891.1 | trpG | SHYC_00310 | SHYC_02220 | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| aroC | AJC94891.1 | SHYC_07200 | SHYC_00310 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.889 |
| aroC | aroE | SHYC_07200 | SHYC_06570 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.926 |
| aroC | aroF | SHYC_07200 | SHYC_05950 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| aroC | menF | SHYC_07200 | SHYC_09140 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.895 |
| aroC | trpG | SHYC_07200 | SHYC_02220 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
| aroE | AJC94891.1 | SHYC_06570 | SHYC_00310 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.886 |
| aroE | aroC | SHYC_06570 | SHYC_07200 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.926 |
| aroE | aroF | SHYC_06570 | SHYC_05950 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
| aroE | menF | SHYC_06570 | SHYC_09140 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.871 |
| aroE | trpG | SHYC_06570 | SHYC_02220 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.679 |
| aroF | AJC94881.1 | SHYC_05950 | SHYC_00260 | 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nonribosomal peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
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