STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC96746.1Dipeptide/tripeptide permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)    
Predicted Functional Partners:
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
  
    0.749
AJC96747.1
Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.735
AJC96744.1
Putative permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.583
AJC96699.1
NAD dependent epimerase/dehydratase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.465
lacD
Tagatose-bisphosphate aldolase; Catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.463
AJC95625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.463
AJC96861.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.461
AJC95479.1
Zinc-binding alcohol dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
    0.460
AJC97078.1
NADH-flavin reductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.459
AJC95928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.457
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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