Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC96757.1Allophanate hydrolase subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
AJC96756.1
Allophanate hydrolase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
AJC96047.1
Allophanate hydrolase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.904
AJC96759.1
Aminodeoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.838
pabB
Para-aminobenzoate synthase component I; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.838
pabA
Para-aminobenzoate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.838
mntH
Transporter MntH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.772
AJC96758.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.736
queC
7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).
       0.415
queD
6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.415
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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