Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AJC96939.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)    
Predicted Functional Partners:
AJC95336.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
AJC95638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
AJC96666.1
NifU-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.743
secY-2
Accessory Sec system translocase SecY2; Part of the accessory SecA2/SecY2 system specifically required for export of possible cell wall proteins. The central subunit of a protein translocation channel.
  
     0.684
AJC95428.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
AJC95115.1
Membrane protein; Similarity to database matches extends upstream of ORF, but no alternate start codon is present; the sequence of this region has been independently verified by PCR/Sanger sequencing; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
AJC95517.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
AJC96794.1
Putative acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.637
AJC95601.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.633
agrB
Accessory regulator protein B; Essential for the production of a quorum sensing system signal molecule, the autoinducing peptide (AIP). This quorum sensing system is responsible for the regulation of the expression of virulence factor genes. Involved in the proteolytic processing of AgrD, the precursor of AIP; Belongs to the AgrB family.
  
     0.622
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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