Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
cntLHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
cntK
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.994
AJC97032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.988
nikA
ABC-type dipeptide/oligopeptide/nickel transport systems, substrate binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.926
AJC97026.1
Major facilitator superfamily transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
AJC97030.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.844
AJC97029.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.820
AJC97028.1
ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.817
AJC97027.1
ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.742
isdI
Heme-degrading monooxygenase IsdI; Iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
AJC95256.1
6-pyruvoyl tetrahydrobiopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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