STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC97078.1NADH-flavin reductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)    
Predicted Functional Partners:
AJC97100.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.667
AJC95635.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.589
AJC95479.1
Zinc-binding alcohol dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
 
    0.562
AJC96861.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.555
AJC97098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.542
AJC96567.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.509
isdI
Heme-degrading monooxygenase IsdI; Iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.499
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.491
AJC95263.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.467
AJC97079.1
Hypothetical protein.
       0.464
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.