Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mhqAPutative ring-cleaving dioxygenase MhqA; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)    
Predicted Functional Partners:
mhqD
Carboxylesterase/hydrolase MhqD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.993
AJC97104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.912
mhqR
HTH-type transcriptional regulator MhqR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
AJC95394.1
LLM family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.643
AJC96702.1
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.634
AJC96679.1
Nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.412
birA
Bifunctional repressor/biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.401
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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