STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhqDCarboxylesterase/hydrolase MhqD; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)    
Predicted Functional Partners:
mhqA
Putative ring-cleaving dioxygenase MhqA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.994
AJC97104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.935
AJC95368.1
Glyoxalase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.826
AJC96226.1
Putative ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.783
asp2
Accessory secretory protein Asp2; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.745
AJC96702.1
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.590
mhqR
HTH-type transcriptional regulator MhqR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
isdI
Heme-degrading monooxygenase IsdI; Iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.426
Your Current Organism:
Staphylococcus hyicus
NCBI taxonomy Id: 1284
Other names: ATCC 11249, CCM 2368, CCUG 6509, CIP 81.58, DSM 20459, JCM 2423, LMG 13352, LMG:13352, Micrococcus hyicus, NCTC 10350, S. hyicus, Staphylococcus hyicus hyicus, Staphylococcus hyicus subsp. hyicus
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