STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_00325Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)    
Predicted Functional Partners:
WA1_00320
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.920
WA1_00335
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.825
WA1_00330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.794
ccsA
C-type cytochrome biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
  
 0.777
WA1_00310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.652
ccsB
Cytochrome C biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
  
 0.613
WA1_19010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
WA1_12935
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.497
WA1_20290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.466
WA1_35355
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.