STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_00375Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)    
Predicted Functional Partners:
WA1_00370
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
WA1_00415
Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.641
WA1_11220
Peptidase C15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase C15 family.
  
     0.589
WA1_41615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
WA1_01660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
WA1_44060
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
WA1_47410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
WA1_49345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.530
WA1_51940
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.530
WA1_50535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.529
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.