STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_01100Dynamin; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)    
Predicted Functional Partners:
WA1_01105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
WA1_43310
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
WA1_30905
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
WA1_01095
Dynamin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.725
WA1_30650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.702
WA1_17235
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.646
WA1_06400
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
WA1_04760
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
WA1_13100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
WA1_24530
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.