WA1_02430 protein (Scytonema hofmannii) - STRING interaction network

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WA1_02430

RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)

Predicted Functional Partners:

WA1_16925

0.891

WA1_37270

0.891

rpoB

0.856

WA1_12655

0.829

WA1_21285

0.829

WA1_29195

0.829

WA1_44060

0.829

WA1_47100

0.829

rpoZ

0.801

rpoA

0.788

Your Current Organism:

Scytonema hofmannii

NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WA1_02430	WA1_12655	WA1_02430	WA1_12655	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_02430	WA1_16925	WA1_02430	WA1_16925	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.891
WA1_02430	WA1_21285	WA1_02430	WA1_21285	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_02430	WA1_29195	WA1_02430	WA1_29195	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_02430	WA1_37270	WA1_02430	WA1_37270	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.891
WA1_02430	WA1_44060	WA1_02430	WA1_44060	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_02430	WA1_47100	WA1_02430	WA1_47100	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_02430	rpoA	WA1_02430	WA1_21515	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.788
WA1_02430	rpoB	WA1_02430	WA1_40265	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.856
WA1_02430	rpoZ	WA1_02430	WA1_05350	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.801
WA1_12655	WA1_02430	WA1_12655	WA1_02430	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_12655	WA1_37270	WA1_12655	WA1_37270	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.433
WA1_16925	WA1_02430	WA1_16925	WA1_02430	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.891
WA1_16925	WA1_29195	WA1_16925	WA1_29195	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
WA1_16925	WA1_37270	WA1_16925	WA1_37270	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ATPase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.999
WA1_16925	rpoB	WA1_16925	WA1_40265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.523
WA1_21285	WA1_02430	WA1_21285	WA1_02430	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_21285	WA1_47100	WA1_21285	WA1_47100	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
WA1_29195	WA1_02430	WA1_29195	WA1_02430	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
WA1_29195	WA1_16925	WA1_29195	WA1_16925	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.458

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