Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
WA1_03335Cyanobacterial phytochrome A; Derived by automated computational analysis using gene prediction method: Protein Homology. (735 aa)    
Predicted Functional Partners:
WA1_28265
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
WA1_03340
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.875
WA1_16925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.856
WA1_17655
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.847
WA1_07695
PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.845
WA1_37035
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.843
WA1_28260
Cyanobacterial phytochrome A; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.836
WA1_04675
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.829
WA1_06250
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.829
WA1_13985
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.829
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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