Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
WA1_04700Endonuclease/exonuclease/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
WA1_17020
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.818
WA1_17930
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.714
WA1_21375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.714
WA1_26350
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.714
WA1_46320
Cysteine lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.714
WA1_02135
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.700
WA1_09250
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.669
WA1_28450
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.669
WA1_16205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
WA1_20950
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.639
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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