STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_05345Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)    
Predicted Functional Partners:
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
   
 0.854
WA1_29600
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
WA1_41990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
WA1_16225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
WA1_07205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
WA1_30850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
WA1_43980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
WA1_28475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
WA1_04155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.665
WA1_40935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.