Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WA1_06220Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
WA1_43310
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.649
WA1_38595
isovaleryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
WA1_29470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.565
WA1_32020
Iron dicitrate transport regulator FecR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.564
WA1_13595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
WA1_26630
Type III-B CRISPR module RAMP protein Cmr4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
WA1_48960
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.521
WA1_26640
CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
WA1_36295
Type III-B CRISPR module RAMP protein Cmr4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
WA1_29260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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