STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_06340Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)    
Predicted Functional Partners:
WA1_06335
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
WA1_18280
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.804
WA1_39290
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.771
WA1_40020
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.510
WA1_05520
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.457
WA1_37515
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
WA1_13335
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.437
WA1_04290
Methyltransferase FkbM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
WA1_06210
Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
WA1_01560
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.408
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.