STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_07150Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)    
Predicted Functional Partners:
WA1_34590
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OprB family.
  
     0.618
WA1_42410
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OprB family.
  
     0.617
WA1_15635
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OprB family.
  
     0.612
WA1_03455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.603
WA1_22725
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
WA1_11885
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
WA1_38810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OprB family.
  
     0.574
WA1_36505
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
WA1_46580
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
WA1_31490
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.