WA1_08030 protein (Scytonema hofmannii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WA1_08030

Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (334 aa)

Predicted Functional Partners:

WA1_08035

0.981

WA1_08040

0.980

WA1_13135

0.975

WA1_13130

0.960

WA1_49960

0.960

WA1_49965

0.959

WA1_36745

0.954

WA1_36740

0.953

WA1_25855

0.798

rpsN

0.648

Your Current Organism:

Scytonema hofmannii

NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WA1_08030	WA1_08035	WA1_08030	WA1_08035	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
WA1_08030	WA1_08040	WA1_08030	WA1_08040	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
WA1_08030	WA1_13130	WA1_08030	WA1_13130	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
WA1_08030	WA1_13135	WA1_08030	WA1_13135	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
WA1_08030	WA1_25855	WA1_08030	WA1_25855	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.798
WA1_08030	WA1_36740	WA1_08030	WA1_36740	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
WA1_08030	WA1_36745	WA1_08030	WA1_36745	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
WA1_08030	WA1_49960	WA1_08030	WA1_49960	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
WA1_08030	WA1_49965	WA1_08030	WA1_49965	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
WA1_08030	rpsN	WA1_08030	WA1_05185	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.648
WA1_08035	WA1_08030	WA1_08035	WA1_08030	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.981
WA1_08035	WA1_08040	WA1_08035	WA1_08040	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
WA1_08035	WA1_13135	WA1_08035	WA1_13135	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
WA1_08035	WA1_25855	WA1_08035	WA1_25855	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.933
WA1_08035	WA1_36740	WA1_08035	WA1_36740	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
WA1_08035	WA1_36745	WA1_08035	WA1_36745	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
WA1_08035	WA1_49965	WA1_08035	WA1_49965	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
WA1_08040	WA1_08030	WA1_08040	WA1_08030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.980
WA1_08040	WA1_08035	WA1_08040	WA1_08035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
WA1_08040	WA1_13130	WA1_08040	WA1_13130	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986

page 1 of 4

Server load: medium (60%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2026

Credits

Access

Info

About