STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_08050Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)    
Predicted Functional Partners:
WA1_11855
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.945
WA1_31175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.942
glpK
Helix-turn-helix transcriptional regulator; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.888
WA1_29315
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.868
WA1_17655
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.832
WA1_04965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.819
WA1_20035
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.819
WA1_15135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.797
WA1_37035
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.795
WA1_25630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.790
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.