STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_08770Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)    
Predicted Functional Partners:
WA1_30680
Polysaccharide pyruvyl transferase CsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.765
WA1_11465
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.686
WA1_15725
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
WA1_05230
S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
WA1_35815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
WA1_22895
S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
sepF
Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
   
 0.651
WA1_39295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.648
WA1_40385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
WA1_43500
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.