STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_08970Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family. (816 aa)    
Predicted Functional Partners:
WA1_05360
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.867
WA1_03300
4-alpha-glucanotransferase; Amylomaltase; acts to release glucose from maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
WA1_17020
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.840
WA1_25275
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.838
WA1_04585
Sucrose-phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.836
WA1_23520
Sucrose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.836
WA1_45030
Sucrose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.836
WA1_00535
Glucan 1,4-alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.831
WA1_07130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family.
 
 0.829
WA1_35590
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.778
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.