Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
WA1_09705Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (765 aa)    
Predicted Functional Partners:
WA1_17020
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.814
WA1_09710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.724
glgA-2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.724
WA1_23420
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
    0.613
WA1_27825
Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.613
WA1_44280
Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.613
WA1_19290
phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
WA1_25000
Glycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
   
    0.606
WA1_37600
Glycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
   
    0.606
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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