STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_10160Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (260 aa)    
Predicted Functional Partners:
WA1_28120
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.792
WA1_44730
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.792
WA1_44855
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.792
WA1_49775
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.792
WA1_49940
Cadmium-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.792
WA1_10155
Translation initiation inhibitor, yjgF family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
WA1_18280
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.433
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
   0.410
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.