STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_10825Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
WA1_10830
Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.957
WA1_36990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.923
WA1_21425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.899
WA1_43125
Ferric reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.799
WA1_09125
Serine acetyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.798
WA1_16780
Iron reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.798
WA1_10815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
WA1_10820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
WA1_36015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.734
WA1_36025
Nitric oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
    
 0.734
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.