STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_11220Peptidase C15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase C15 family. (170 aa)    
Predicted Functional Partners:
WA1_16825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
WA1_48535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
WA1_22010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.641
WA1_11225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
WA1_07655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.627
WA1_04860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-glutamate cyclase family.
   
    0.623
WA1_04900
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the D-glutamate cyclase family.
   
    0.623
hisH
Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.597
WA1_41705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.595
WA1_41615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.