STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_12335Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)    
Predicted Functional Partners:
WA1_10085
AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
WA1_28315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
WA1_07645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
WA1_29255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
WA1_30240
Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SecE/SEC61-gamma family.
  
     0.774
WA1_39220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
WA1_27740
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
WA1_34515
Small-conductance mechanosensitive channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
WA1_11205
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
WA1_34545
Beta-carotene hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.