WA1_12565 protein (Scytonema hofmannii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WA1_12565

DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)

Predicted Functional Partners:

WA1_12560

0.949

WA1_41880

0.784

WA1_00145

0.540

WA1_01205

0.540

WA1_04850

0.540

WA1_07850

0.540

WA1_14635

0.540

WA1_19810

0.540

WA1_20480

0.540

WA1_24580

0.540

Your Current Organism:

Scytonema hofmannii

NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

Server load: low (40%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About

node1	node2	node1 annotation	node2 annotation	score
WA1_00145	WA1_12565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_01205	WA1_12565	Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_04850	WA1_12565	Plasmid stabilization system; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_07850	WA1_12565	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12560	WA1_12565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
WA1_12565	WA1_00145	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12565	WA1_01205	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12565	WA1_04850	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12565	WA1_07850	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12565	WA1_12560	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
WA1_12565	WA1_14635	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12565	WA1_19810	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12565	WA1_20480	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.540
WA1_12565	WA1_24580	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_12565	WA1_41880	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
WA1_14635	WA1_12565	Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_19810	WA1_12565	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_20480	WA1_12565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_24580	WA1_12565	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
WA1_41880	WA1_12565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784