STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_12680UDP-N-acetyl-D-mannosaminuronic acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family. (251 aa)    
Predicted Functional Partners:
WA1_30680
Polysaccharide pyruvyl transferase CsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.896
WA1_42370
UDP-N-acetyl glucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.686
WA1_28570
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.654
WA1_04245
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.652
WA1_15920
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.622
WA1_04380
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.585
WA1_06540
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.585
WA1_06650
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.585
WA1_09285
Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.585
WA1_15985
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.585
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.