STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_13085Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)    
Predicted Functional Partners:
WA1_37650
Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.879
WA1_37435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.844
WA1_42490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.844
WA1_43635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.844
WA1_13090
GTPase, G3E family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
WA1_13080
Metallophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  
0.776
WA1_22195
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.736
WA1_28665
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.736
WA1_27875
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.545
WA1_13075
Cytosine deaminase; Catalyzes the deamination of cytosine to uracil and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.524
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.