STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_13810Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa)    
Predicted Functional Partners:
WA1_21865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.731
WA1_05490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.678
WA1_38240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.676
WA1_47930
DNA-binding protein; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.672
WA1_10235
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.671
WA1_21860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
WA1_14180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.427
WA1_13805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.407
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.401
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.