STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_16600Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
WA1_28940
Acetate kinase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
WA1_11535
Aspartoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
  
     0.735
WA1_14705
Aspartoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
  
     0.728
WA1_37760
Chaperone protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
WA1_28630
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
WA1_14730
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.623
WA1_48250
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.573
WA1_22760
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
WA1_38380
3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
WA1_51360
Monoamine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.