STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_17280Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
WA1_17275
Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.887
WA1_27985
Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.776
WA1_19545
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
WA1_17285
DJ-1/PfpI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.526
WA1_34625
DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.500
WA1_22575
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.487
WA1_17020
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.486
WA1_17290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.469
WA1_37585
Maltooligosyl trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.460
WA1_16530
Manganese catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.451
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.