STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_17285DJ-1/PfpI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)    
Predicted Functional Partners:
WA1_25695
Fatty aldehyde?generating acyl-ACP reductase; in cyanobacteria this enzyme functions in alkane biosynthesis along with aldehyde decarbonylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.893
WA1_24290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.831
WA1_08885
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.826
WA1_10420
Molybdenum cofactor biosynthesis protein MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.801
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
   0.727
WA1_18245
Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.720
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.720
WA1_30785
Rhodanese-related sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.720
WA1_44030
Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.720
WA1_03835
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.718
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.