STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_17770Peptidase M3; Derived by automated computational analysis using gene prediction method: Protein Homology. (701 aa)    
Predicted Functional Partners:
WA1_12005
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.639
WA1_42260
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.639
WA1_32345
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
  
 0.465
WA1_48560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.465
WA1_46015
tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. Belongs to the TtcA family.
  
     0.437
WA1_27385
Prolyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.429
WA1_17755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.425
fdhD
Formate dehydrogenase accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.425
WA1_17765
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.425
WA1_22625
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.406
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.