STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_20005Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (425 aa)    
Predicted Functional Partners:
WA1_18280
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
   
 
  0.793
WA1_15250
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.769
WA1_20000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
WA1_04745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.760
WA1_24690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.751
WA1_20680
Chase2 sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
WA1_05315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.744
WA1_39090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
WA1_06175
Group 3/4 sigma-70 RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.
 
     0.726
WA1_29015
Group 3/4 sigma-70 RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.