Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WA1_05195 | WA1_21300 | WA1_05195 | WA1_21300 | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.705 |
| WA1_05195 | WA1_41325 | WA1_05195 | WA1_41325 | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.656 |
| WA1_06440 | WA1_08050 | WA1_06440 | WA1_08050 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
| WA1_06440 | WA1_21300 | WA1_06440 | WA1_21300 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.815 |
| WA1_08050 | WA1_06440 | WA1_08050 | WA1_06440 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
| WA1_08050 | WA1_21300 | WA1_08050 | WA1_21300 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.815 |
| WA1_18280 | WA1_21300 | WA1_18280 | WA1_21300 | Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.729 |
| WA1_21300 | WA1_05195 | WA1_21300 | WA1_05195 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.705 |
| WA1_21300 | WA1_06440 | WA1_21300 | WA1_06440 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
| WA1_21300 | WA1_08050 | WA1_21300 | WA1_08050 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
| WA1_21300 | WA1_18280 | WA1_21300 | WA1_18280 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.729 |
| WA1_21300 | WA1_41325 | WA1_21300 | WA1_41325 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
| WA1_21300 | WA1_45810 | WA1_21300 | WA1_45810 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| WA1_21300 | WA1_51330 | WA1_21300 | WA1_51330 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.762 |
| WA1_21300 | pepA | WA1_21300 | WA1_41635 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.531 |
| WA1_21300 | pheT | WA1_21300 | WA1_16185 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.584 |
| WA1_21300 | secD | WA1_21300 | WA1_36665 | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.659 |
| WA1_41325 | WA1_05195 | WA1_41325 | WA1_05195 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.656 |
| WA1_41325 | WA1_21300 | WA1_41325 | WA1_21300 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxyl-terminal protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.510 |
| WA1_41325 | secD | WA1_41325 | WA1_36665 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.420 |
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