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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_21650Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)    
Predicted Functional Partners:
WA1_41870
Tail length tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.765
WA1_38660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
WA1_31905
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
WA1_10790
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.689
WA1_13735
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.689
WA1_41085
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.689
WA1_41095
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.689
WA1_05785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.683
WA1_13195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
WA1_44595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.673
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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