STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_21675Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)    
Predicted Functional Partners:
WA1_21670
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
WA1_17220
Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.733
nnrD
Restriction endonuclease subunit R; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repa [...]
   
    0.515
WA1_51090
Hybrid sensor histidine kinase/response regulator; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
WA1_17695
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.435
WA1_16890
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
WA1_24270
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
WA1_33690
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
WA1_44150
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
WA1_21665
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.425
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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