STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_23760Lanthionine synthetase C family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1090 aa)    
Predicted Functional Partners:
WA1_13375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.687
WA1_39845
Bacteriocin-type transport-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
WA1_39860
Cation tolerance protein CutA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
WA1_23680
NHLP bacteriocin export ABC transporter permease/ATPase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
WA1_13380
NHLP bacteriocin export ABC transporter permease/ATPase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
WA1_39850
NHLP bacteriocin system secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
WA1_19370
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
WA1_04950
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
WA1_47335
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
WA1_37725
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.