STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_24290Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)    
Predicted Functional Partners:
WA1_31940
RNA-binding protein hfq; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.895
WA1_22195
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.889
WA1_28665
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.889
WA1_07795
Isocitrate dehydrogenase (NADP(+)); Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.869
WA1_05240
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.867
WA1_17285
DJ-1/PfpI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.831
WA1_24285
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.816
WA1_24280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.802
katG
Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
    
 0.796
WA1_02680
Acetolactate synthase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.776
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.