STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_25515Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
WA1_19365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
WA1_20220
S-(hydroxymethyl)glutathione dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
  
 0.562
WA1_14205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
WA1_19560
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.
  
     0.465
WA1_44320
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
WA1_27875
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.438
WA1_22090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
WA1_36990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.419
WA1_33300
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
WA1_00135
Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.