STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_32510Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
WA1_32505
Carbon dioxide-concentrating mechanism protein CcmM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.984
WA1_14445
Chaperonin family protein RbcX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.803
rbcL
Ribulose 1,5-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
    
 
 0.802
WA1_10435
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.779
WA1_29375
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.779
WA1_33555
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.779
WA1_35025
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.779
WA1_32450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
WA1_11885
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
WA1_11020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.