Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WA1_06780 | WA1_33935 | WA1_06780 | WA1_33935 | Tryptophan halogenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.809 |
| WA1_06780 | ssuB | WA1_06780 | WA1_33025 | Tryptophan halogenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aliphatic sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.812 |
| WA1_06780 | ssuC | WA1_06780 | WA1_33055 | Tryptophan halogenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate transporter permease subunit; Part of the ABC type transport system for alkanesulfonate SsuABC; SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.812 |
| WA1_06780 | ssuD | WA1_06780 | WA1_33060 | Tryptophan halogenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.969 |
| WA1_07725 | WA1_15005 | WA1_07725 | WA1_15005 | Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
| WA1_07725 | WA1_33935 | WA1_07725 | WA1_33935 | Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.807 |
| WA1_07725 | ssuB | WA1_07725 | WA1_33025 | Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aliphatic sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.888 |
| WA1_15000 | WA1_15005 | WA1_15000 | WA1_15005 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
| WA1_15000 | WA1_33935 | WA1_15000 | WA1_33935 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.834 |
| WA1_15000 | ssuB | WA1_15000 | WA1_33025 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aliphatic sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.893 |
| WA1_15000 | ssuD | WA1_15000 | WA1_33060 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.731 |
| WA1_15005 | WA1_07725 | WA1_15005 | WA1_07725 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
| WA1_15005 | WA1_15000 | WA1_15005 | WA1_15000 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
| WA1_15005 | WA1_16925 | WA1_15005 | WA1_16925 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.676 |
| WA1_15005 | WA1_17655 | WA1_15005 | WA1_17655 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.709 |
| WA1_15005 | WA1_33935 | WA1_15005 | WA1_33935 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
| WA1_15005 | WA1_37035 | WA1_15005 | WA1_37035 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.737 |
| WA1_15005 | ssuB | WA1_15005 | WA1_33025 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aliphatic sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.660 |
| WA1_15005 | ssuC | WA1_15005 | WA1_33055 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate transporter permease subunit; Part of the ABC type transport system for alkanesulfonate SsuABC; SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
| WA1_16925 | WA1_15005 | WA1_16925 | WA1_15005 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.676 |
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