STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_39365Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (120 aa)    
Predicted Functional Partners:
WA1_07695
PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.960
WA1_10695
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.937
WA1_46455
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.929
WA1_45800
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.928
WA1_21285
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.921
WA1_12655
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.914
WA1_12660
Fused response regulator/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.913
WA1_37035
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.912
WA1_44060
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.901
WA1_29195
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.885
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.